Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK2O00526 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
UPK2O00526 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK2O00526 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK2O00526 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.58□□□□□ -0.56
UPK2O00526 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.58□□□□□ -0.56
UPK2O00526 TMEM14DP-201ENST00000422205 345 ntBASIC11.58□□□□□ -0.56
UPK2O00526 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.58□□□□□ -0.56
UPK2O00526 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
UPK2O00526 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK2O00526 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.58□□□□□ -0.56
UPK2O00526 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
UPK2O00526 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.58□□□□□ -0.56
UPK2O00526 AC132938.2-201ENST00000579188 680 ntBASIC11.58□□□□□ -0.56
UPK2O00526 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
UPK2O00526 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK2O00526 AC021016.3-201ENST00000608367 477 ntBASIC11.58□□□□□ -0.56
UPK2O00526 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.58□□□□□ -0.56
UPK2O00526 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK2O00526 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK2O00526 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.58□□□□□ -0.56
UPK2O00526 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 AL137784.3-201ENST00000623858 2288 ntBASIC11.58□□□□□ -0.56
UPK2O00526 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK2O00526 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.58□□□□□ -0.56
UPK2O00526 AHCYP2-201ENST00000430630 1300 ntBASIC11.58□□□□□ -0.56
UPK2O00526 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
UPK2O00526 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
UPK2O00526 TCAF1P1-201ENST00000414990 2232 ntBASIC11.58□□□□□ -0.56
UPK2O00526 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
UPK2O00526 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 LINC02486-201ENST00000604157 3000 ntBASIC11.57□□□□□ -0.56
UPK2O00526 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.57□□□□□ -0.56
UPK2O00526 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.57□□□□□ -0.56
UPK2O00526 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.57□□□□□ -0.56
UPK2O00526 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 DUX4L46-201ENST00000566845 751 ntBASIC11.57□□□□□ -0.56
UPK2O00526 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK2O00526 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 AC132192.2-201ENST00000596206 1147 ntBASIC11.57□□□□□ -0.56
UPK2O00526 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
UPK2O00526 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
UPK2O00526 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK2O00526 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms