Protein–RNA interactions for Protein: O00463

TRAF5, TNF receptor-associated factor 5, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5O00463 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF5O00463 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAF5O00463 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.08■□□□□ 0.32
TRAF5O00463 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRAF5O00463 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF5O00463 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAF5O00463 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
TRAF5O00463 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAF5O00463 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 AL591122.2-201ENST00000624125 1853 ntBASIC17.07■□□□□ 0.32
TRAF5O00463 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF5O00463 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAF5O00463 AL590440.2-201ENST00000641973 1595 ntBASIC17.07■□□□□ 0.32
TRAF5O00463 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
TRAF5O00463 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 AC009093.10-201ENST00000641956 1442 ntBASIC17.07■□□□□ 0.32
TRAF5O00463 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRAF5O00463 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAF5O00463 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC17.07■□□□□ 0.32
TRAF5O00463 OR2A1-AS1-210ENST00000496968 531 ntBASIC17.07■□□□□ 0.32
TRAF5O00463 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF5O00463 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.07■□□□□ 0.32
TRAF5O00463 AC068831.5-201ENST00000557387 328 ntBASIC17.07■□□□□ 0.32
TRAF5O00463 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAF5O00463 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAF5O00463 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRAF5O00463 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 AGGF1P1-201ENST00000509500 2073 ntBASIC17.07■□□□□ 0.32
TRAF5O00463 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRAF5O00463 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAF5O00463 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAF5O00463 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF5O00463 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF5O00463 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF5O00463 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRAF5O00463 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF5O00463 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAF5O00463 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF5O00463 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF5O00463 AC098934.1-203ENST00000442868 1262 ntBASIC17.06■□□□□ 0.32
TRAF5O00463 RN7SL288P-201ENST00000490496 291 ntBASIC17.06■□□□□ 0.32
TRAF5O00463 AC008026.2-201ENST00000495438 348 ntBASIC17.06■□□□□ 0.32
TRAF5O00463 RPS23-207ENST00000511844 530 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF5O00463 IGHV1-12-201ENST00000518307 205 ntBASIC17.06■□□□□ 0.32
TRAF5O00463 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.06■□□□□ 0.32
TRAF5O00463 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF5O00463 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
TRAF5O00463 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF5O00463 AL160191.2-201ENST00000603975 601 ntBASIC17.06■□□□□ 0.32
TRAF5O00463 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.06■□□□□ 0.32
TRAF5O00463 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 LINC00528-201ENST00000600723 2160 ntBASIC17.06■□□□□ 0.32
TRAF5O00463 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRAF5O00463 MROH4P-201ENST00000431302 1578 ntBASIC17.06■□□□□ 0.32
TRAF5O00463 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAF5O00463 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAF5O00463 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms