Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 POU5F1P2-201ENST00000521750 823 ntBASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NPIPA2E9PIF3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 CYP4F23P-201ENST00000593402 1579 ntBASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 AC116345.2-201ENST00000512837 523 ntBASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 AL157813.1-201ENST00000612996 587 ntBASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 AC139712.1-201ENST00000378256 1875 ntBASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.16□□□□□ -0.3
NPIPA2E9PIF3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 AC139749.1-202ENST00000617529 3139 ntBASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.15□□□□□ -0.3
NPIPA2E9PIF3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms