Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.96□□□□□ -0.65
COLCA2A8K830 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.96□□□□□ -0.65
COLCA2A8K830 CLN6-204ENST00000564752 900 ntTSL 3 BASIC10.96□□□□□ -0.65
COLCA2A8K830 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
COLCA2A8K830 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC10.96□□□□□ -0.65
COLCA2A8K830 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.96□□□□□ -0.65
COLCA2A8K830 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC10.96□□□□□ -0.65
COLCA2A8K830 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC10.96□□□□□ -0.65
COLCA2A8K830 CLN6-214ENST00000636314 442 ntTSL 3 BASIC10.96□□□□□ -0.65
COLCA2A8K830 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
COLCA2A8K830 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.96□□□□□ -0.66
COLCA2A8K830 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
COLCA2A8K830 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 AC020763.3-201ENST00000625095 2904 ntBASIC10.96□□□□□ -0.66
COLCA2A8K830 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC10.96□□□□□ -0.66
COLCA2A8K830 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC10.96□□□□□ -0.66
COLCA2A8K830 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
COLCA2A8K830 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
COLCA2A8K830 CSPG4P11-201ENST00000560634 4910 ntBASIC10.96□□□□□ -0.66
COLCA2A8K830 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
COLCA2A8K830 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
COLCA2A8K830 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC10.96□□□□□ -0.66
COLCA2A8K830 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
COLCA2A8K830 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 AL845472.1-202ENST00000624675 4080 ntBASIC10.95□□□□□ -0.66
COLCA2A8K830 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 AL358781.1-202ENST00000321081 1360 ntBASIC10.95□□□□□ -0.66
COLCA2A8K830 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 MME-217ENST00000616757 1315 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
COLCA2A8K830 YBX1P2-201ENST00000489612 999 ntBASIC10.95□□□□□ -0.66
COLCA2A8K830 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.95□□□□□ -0.66
COLCA2A8K830 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.95□□□□□ -0.66
COLCA2A8K830 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 AP001462.1-201ENST00000594089 452 ntBASIC10.95□□□□□ -0.66
COLCA2A8K830 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 AC008667.4-201ENST00000607370 168 ntBASIC10.95□□□□□ -0.66
COLCA2A8K830 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.95□□□□□ -0.66
COLCA2A8K830 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC10.95□□□□□ -0.66
COLCA2A8K830 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
COLCA2A8K830 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
COLCA2A8K830 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms