Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CCDC187A0A096LP49 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCDC187A0A096LP49 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCDC187A0A096LP49 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CCDC187A0A096LP49 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.58□□□□□ -0.23
CCDC187A0A096LP49 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CCDC187A0A096LP49 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 SORD2P-201ENST00000558556 1069 ntBASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 AL021707.6-201ENST00000609212 491 ntBASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 AC002472.4-201ENST00000641915 272 ntBASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CCDC187A0A096LP49 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 PPP1R2P4-201ENST00000424051 595 ntBASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 AC093909.3-201ENST00000504783 336 ntBASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CCDC187A0A096LP49 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms