Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AC104758.3-203ENST00000562938 2123 ntBASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 UXT-AS1-201ENST00000590504 1525 ntBASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AC027307.2-201ENST00000591252 911 ntBASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 LINC00628-201ENST00000628516 1289 ntBASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AC084121.4-201ENST00000641598 221 ntBASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AF228730.8-201ENST00000642140 221 ntBASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LRCH1Q9Y2L9 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 LINC01165-201ENST00000445190 1623 ntBASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 KRT8P14-201ENST00000414254 1442 ntBASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 AC093520.2-201ENST00000561830 333 ntBASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 AC027796.2-201ENST00000575326 344 ntBASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 AC005014.1-201ENST00000432006 2976 ntBASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 AL137783.1-201ENST00000623494 1896 ntBASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.76□□□□□ -0.21
LRCH1Q9Y2L9 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LRCH1Q9Y2L9 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms