Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
DENND2AQ9ULE3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.34■□□□□ 0.37
DENND2AQ9ULE3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DENND2AQ9ULE3 LINC01230-201ENST00000625222 3017 ntBASIC17.34■□□□□ 0.37
DENND2AQ9ULE3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 AC026748.1-201ENST00000624349 3251 ntBASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.33■□□□□ 0.37
DENND2AQ9ULE3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 RPSAP31-201ENST00000416648 895 ntBASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 RPL7P35-201ENST00000446943 740 ntBASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 AL512310.5-201ENST00000551999 515 ntBASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 DNM1P30-201ENST00000563586 452 ntBASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 CICP16-201ENST00000502609 2813 ntBASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DENND2AQ9ULE3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 AC007952.5-201ENST00000572818 1486 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 LINC00115-201ENST00000473798 1317 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 AC006987.1-201ENST00000413610 527 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 AL512306.1-201ENST00000432698 848 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 NDUFB10P1-201ENST00000567319 521 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 RN7SL665P-201ENST00000578793 300 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 AL133467.4-201ENST00000602953 725 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 AC084781.1-201ENST00000613737 656 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 MIR7845-201ENST00000618396 99 ntBASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DENND2AQ9ULE3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 TEKT4P2-202ENST00000559466 1312 ntBASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DENND2AQ9ULE3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms