Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 AC133540.1-201ENST00000620845 1019 ntBASIC14.42□□□□□ -0.1
SPASTQ9UBP0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 AC144522.1-201ENST00000625111 1658 ntBASIC14.42□□□□□ -0.1
SPASTQ9UBP0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 MRPL37P1-201ENST00000592451 1337 ntBASIC14.41□□□□□ -0.1
SPASTQ9UBP0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 AL645933.1-201ENST00000440087 609 ntBASIC14.41□□□□□ -0.1
SPASTQ9UBP0 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 FTLP1-201ENST00000449155 526 ntBASIC14.41□□□□□ -0.1
SPASTQ9UBP0 EEF1DP6-201ENST00000449232 372 ntBASIC14.41□□□□□ -0.1
SPASTQ9UBP0 AC234782.1-201ENST00000451950 919 ntBASIC14.41□□□□□ -0.1
SPASTQ9UBP0 TMEM198B-204ENST00000484016 896 ntBASIC14.41□□□□□ -0.1
SPASTQ9UBP0 AC006122.1-201ENST00000493323 440 ntBASIC14.41□□□□□ -0.1
SPASTQ9UBP0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 AL136172.1-201ENST00000598590 1394 ntBASIC14.41□□□□□ -0.1
SPASTQ9UBP0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SPASTQ9UBP0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 KRT8P21-201ENST00000430398 1491 ntBASIC14.4□□□□□ -0.1
SPASTQ9UBP0 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms