Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NICN1Q9BSH3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 FKBP4P6-201ENST00000457486 1332 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AC064801.2-201ENST00000625052 1303 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 MSTO2P-201ENST00000314835 1709 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AC245100.3-201ENST00000441281 285 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AC093433.1-201ENST00000458048 571 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AC022137.2-201ENST00000503482 481 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AP001063.1-201ENST00000568332 529 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 TMEM261P1-201ENST00000604899 340 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 BX088702.1-201ENST00000610784 235 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 AC114271.1-201ENST00000612689 2813 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 NCLP1-201ENST00000445357 1963 ntBASIC12.43□□□□□ -0.42
NICN1Q9BSH3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.43□□□□□ -0.42
NICN1Q9BSH3 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.42□□□□□ -0.42
NICN1Q9BSH3 DFFBP1-201ENST00000433250 979 ntBASIC12.42□□□□□ -0.42
NICN1Q9BSH3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms