Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 GOLGA2P4-201ENST00000441462 777 ntBASIC12.87□□□□□ -0.35
VRK1Q99986 CNN2P10-201ENST00000443067 918 ntBASIC12.87□□□□□ -0.35
VRK1Q99986 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 EEF1DP1-201ENST00000585891 896 ntBASIC12.87□□□□□ -0.35
VRK1Q99986 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
VRK1Q99986 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 AL022328.3-201ENST00000607943 679 ntBASIC12.87□□□□□ -0.35
VRK1Q99986 AC244093.1-201ENST00000610837 814 ntBASIC12.87□□□□□ -0.35
VRK1Q99986 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 AL603764.1-201ENST00000636452 321 ntBASIC12.87□□□□□ -0.35
VRK1Q99986 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
VRK1Q99986 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
VRK1Q99986 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VRK1Q99986 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VRK1Q99986 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 AC012508.2-201ENST00000567613 1472 ntBASIC12.86□□□□□ -0.35
VRK1Q99986 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VRK1Q99986 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.86□□□□□ -0.35
VRK1Q99986 AC007969.1-201ENST00000433675 447 ntBASIC12.86□□□□□ -0.35
VRK1Q99986 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.86□□□□□ -0.35
VRK1Q99986 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.86□□□□□ -0.35
VRK1Q99986 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
VRK1Q99986 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.86□□□□□ -0.35
VRK1Q99986 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.86□□□□□ -0.35
VRK1Q99986 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 MIR6787-201ENST00000616675 61 ntBASIC12.86□□□□□ -0.35
VRK1Q99986 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.86□□□□□ -0.35
VRK1Q99986 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
VRK1Q99986 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
VRK1Q99986 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 AC015818.8-201ENST00000587907 1519 ntBASIC12.86□□□□□ -0.35
VRK1Q99986 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VRK1Q99986 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.86□□□□□ -0.35
VRK1Q99986 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
VRK1Q99986 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VRK1Q99986 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VRK1Q99986 AL360270.3-201ENST00000609118 1348 ntBASIC12.86□□□□□ -0.35
VRK1Q99986 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 KRT8P4-201ENST00000509735 1454 ntBASIC12.85□□□□□ -0.35
VRK1Q99986 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
VRK1Q99986 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
VRK1Q99986 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VRK1Q99986 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.85□□□□□ -0.35
VRK1Q99986 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms