Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.58■□□□□ 0.24
ARID3AQ99856 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ARID3AQ99856 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.58■□□□□ 0.24
ARID3AQ99856 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.58■□□□□ 0.24
ARID3AQ99856 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.58■□□□□ 0.24
ARID3AQ99856 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.58■□□□□ 0.24
ARID3AQ99856 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.58■□□□□ 0.24
ARID3AQ99856 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.58■□□□□ 0.24
ARID3AQ99856 AC007431.3-201ENST00000623221 587 ntBASIC16.58■□□□□ 0.24
ARID3AQ99856 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.58■□□□□ 0.24
ARID3AQ99856 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ARID3AQ99856 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 AP000845.1-201ENST00000581677 2131 ntBASIC16.58■□□□□ 0.24
ARID3AQ99856 AC023090.2-201ENST00000625182 2110 ntBASIC16.58■□□□□ 0.24
ARID3AQ99856 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.58■□□□□ 0.24
ARID3AQ99856 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ARID3AQ99856 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ARID3AQ99856 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ARID3AQ99856 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ARID3AQ99856 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 DRD5P1-201ENST00000456605 1438 ntBASIC16.57■□□□□ 0.24
ARID3AQ99856 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.57■□□□□ 0.24
ARID3AQ99856 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.57■□□□□ 0.24
ARID3AQ99856 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.57■□□□□ 0.24
ARID3AQ99856 AC123567.1-201ENST00000548294 1261 ntBASIC16.57■□□□□ 0.24
ARID3AQ99856 RRP7BP-205ENST00000566851 833 ntBASIC16.57■□□□□ 0.24
ARID3AQ99856 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 AC008494.3-201ENST00000606615 944 ntBASIC16.57■□□□□ 0.24
ARID3AQ99856 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
ARID3AQ99856 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ARID3AQ99856 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ARID3AQ99856 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ARID3AQ99856 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.57■□□□□ 0.24
ARID3AQ99856 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
ARID3AQ99856 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
ARID3AQ99856 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.56■□□□□ 0.24
ARID3AQ99856 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.56■□□□□ 0.24
ARID3AQ99856 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.56■□□□□ 0.24
ARID3AQ99856 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC16.56■□□□□ 0.24
ARID3AQ99856 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ARID3AQ99856 PER1-202ENST00000354903 3115 ntTSL 2 BASIC16.56■□□□□ 0.24
ARID3AQ99856 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ARID3AQ99856 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms