Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.04□□□□□ -0.16
PKP4Q99569 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PKP4Q99569 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.04□□□□□ -0.16
PKP4Q99569 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.04□□□□□ -0.16
PKP4Q99569 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 FAM86MP-201ENST00000340703 885 ntBASIC14.04□□□□□ -0.16
PKP4Q99569 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.04□□□□□ -0.16
PKP4Q99569 OR2R1P-201ENST00000441404 914 ntBASIC14.04□□□□□ -0.16
PKP4Q99569 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.04□□□□□ -0.16
PKP4Q99569 AC106794.1-201ENST00000506935 792 ntBASIC14.04□□□□□ -0.16
PKP4Q99569 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.04□□□□□ -0.16
PKP4Q99569 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.04□□□□□ -0.16
PKP4Q99569 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.04□□□□□ -0.16
PKP4Q99569 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.04□□□□□ -0.16
PKP4Q99569 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PKP4Q99569 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.04□□□□□ -0.16
PKP4Q99569 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.04□□□□□ -0.16
PKP4Q99569 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.04□□□□□ -0.16
PKP4Q99569 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PKP4Q99569 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PKP4Q99569 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.04□□□□□ -0.16
PKP4Q99569 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKP4Q99569 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PKP4Q99569 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PKP4Q99569 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
PKP4Q99569 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.03□□□□□ -0.16
PKP4Q99569 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.03□□□□□ -0.16
PKP4Q99569 XBP1P1-201ENST00000436573 652 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 AC007274.1-201ENST00000439805 662 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.03□□□□□ -0.16
PKP4Q99569 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 AC005740.2-201ENST00000511085 419 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 AC044849.1-201ENST00000519737 1188 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.03□□□□□ -0.16
PKP4Q99569 MIR4538-201ENST00000581377 78 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.03□□□□□ -0.16
PKP4Q99569 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.03□□□□□ -0.16
PKP4Q99569 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 AC090386.2-201ENST00000623010 1039 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 AHCYP4-201ENST00000419201 1315 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PKP4Q99569 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PKP4Q99569 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PKP4Q99569 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKP4Q99569 AC090643.2-201ENST00000623442 2029 ntBASIC14.03□□□□□ -0.16
PKP4Q99569 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms