Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 AC092127.1-201ENST00000567093 3455 ntBASIC13.14□□□□□ -0.31
LRRC46Q96FV0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LRRC46Q96FV0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AL157791.1-201ENST00000553667 1699 ntBASIC13.13□□□□□ -0.31
LRRC46Q96FV0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 TLE1P1-201ENST00000422965 589 ntBASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SPTLC1P5-201ENST00000450718 252 ntBASIC13.13□□□□□ -0.31
LRRC46Q96FV0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AC026434.2-201ENST00000506094 1078 ntBASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 DUX4L46-201ENST00000566845 751 ntBASIC13.13□□□□□ -0.31
LRRC46Q96FV0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AC140479.7-201ENST00000636301 2332 ntBASIC13.13□□□□□ -0.31
LRRC46Q96FV0 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AC004899.1-201ENST00000424687 1714 ntBASIC13.13□□□□□ -0.31
LRRC46Q96FV0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LRRC46Q96FV0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.12□□□□□ -0.31
LRRC46Q96FV0 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms