Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 KRT8P24-201ENST00000560290 1559 ntBASIC14.87□□□□□ -0.03
HDAC11Q96DB2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 Z93015.1-201ENST00000451718 390 ntBASIC14.87□□□□□ -0.03
HDAC11Q96DB2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 MST1P2-201ENST00000457982 2291 ntBASIC14.87□□□□□ -0.03
HDAC11Q96DB2 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 AC090643.2-201ENST00000623442 2029 ntBASIC14.87□□□□□ -0.03
HDAC11Q96DB2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HDAC11Q96DB2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 RN7SL560P-201ENST00000577943 264 ntBASIC14.86□□□□□ -0.03
HDAC11Q96DB2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 AL022313.4-201ENST00000562756 2046 ntBASIC14.86□□□□□ -0.03
HDAC11Q96DB2 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HDAC11Q96DB2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms