Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 RPSAP12-201ENST00000435879 888 ntBASIC14.12□□□□□ -0.15
CLDN23Q96B33 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 AC120498.7-201ENST00000562876 330 ntBASIC14.12□□□□□ -0.15
CLDN23Q96B33 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 MIR4254-201ENST00000581063 76 ntBASIC14.12□□□□□ -0.15
CLDN23Q96B33 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 AC026336.4-201ENST00000624565 1050 ntBASIC14.12□□□□□ -0.15
CLDN23Q96B33 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN23Q96B33 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLDN23Q96B33 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 AC138035.3-201ENST00000622706 2791 ntBASIC14.11□□□□□ -0.15
CLDN23Q96B33 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 RN7SL602P-201ENST00000578326 324 ntBASIC14.11□□□□□ -0.15
CLDN23Q96B33 MIR4746-201ENST00000579802 71 ntBASIC14.11□□□□□ -0.15
CLDN23Q96B33 RN7SL718P-201ENST00000581254 303 ntBASIC14.11□□□□□ -0.15
CLDN23Q96B33 AL031673.1-201ENST00000611460 466 ntBASIC14.11□□□□□ -0.15
CLDN23Q96B33 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.11□□□□□ -0.15
CLDN23Q96B33 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN23Q96B33 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN23Q96B33 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 AC063926.3-201ENST00000624734 5658 ntBASIC14.1□□□□□ -0.15
CLDN23Q96B33 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN23Q96B33 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLDN23Q96B33 SNORA57-201ENST00000383870 149 ntBASIC14.1□□□□□ -0.15
CLDN23Q96B33 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms