Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 AC064801.2-201ENST00000625052 1303 ntBASIC13.93□□□□□ -0.18
VPS33AQ96AX1 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.93□□□□□ -0.18
VPS33AQ96AX1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.93□□□□□ -0.18
VPS33AQ96AX1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 SERBP1P5-201ENST00000510079 1181 ntBASIC13.93□□□□□ -0.18
VPS33AQ96AX1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 AC114271.1-201ENST00000612689 2813 ntBASIC13.93□□□□□ -0.18
VPS33AQ96AX1 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VPS33AQ96AX1 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 AL928654.5-201ENST00000624831 2501 ntBASIC13.92□□□□□ -0.18
VPS33AQ96AX1 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 AL445209.1-201ENST00000607269 3491 ntBASIC13.92□□□□□ -0.18
VPS33AQ96AX1 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 CTBP2P3-201ENST00000585629 1255 ntBASIC13.92□□□□□ -0.18
VPS33AQ96AX1 AC009118.2-201ENST00000613275 655 ntBASIC13.92□□□□□ -0.18
VPS33AQ96AX1 AC145423.3-201ENST00000615987 467 ntBASIC13.92□□□□□ -0.18
VPS33AQ96AX1 ENPP7P14-201ENST00000621765 1040 ntBASIC13.92□□□□□ -0.18
VPS33AQ96AX1 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 NCLP1-201ENST00000445357 1963 ntBASIC13.92□□□□□ -0.18
VPS33AQ96AX1 KRT8P28-201ENST00000433288 1390 ntBASIC13.92□□□□□ -0.18
VPS33AQ96AX1 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VPS33AQ96AX1 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms