Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 HSPA7-201ENST00000445535 1927 ntBASIC15.26■□□□□ 0.03
ATP2A3Q93084 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.26■□□□□ 0.03
ATP2A3Q93084 HINT2P1-201ENST00000419438 481 ntBASIC15.26■□□□□ 0.03
ATP2A3Q93084 AL035414.1-201ENST00000451327 857 ntBASIC15.26■□□□□ 0.03
ATP2A3Q93084 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 AL353637.1-201ENST00000451571 732 ntBASIC15.26■□□□□ 0.03
ATP2A3Q93084 HLA-J-204ENST00000495278 958 ntBASIC15.26■□□□□ 0.03
ATP2A3Q93084 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 AL353726.2-201ENST00000623259 884 ntBASIC15.26■□□□□ 0.03
ATP2A3Q93084 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 AC027601.5-201ENST00000624065 2482 ntBASIC15.26■□□□□ 0.03
ATP2A3Q93084 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATP2A3Q93084 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP2A3Q93084 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 VDAC1P1-201ENST00000439229 848 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 KLF2P1-201ENST00000447438 1042 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 GCOM2-201ENST00000509133 1104 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 MIR3907-201ENST00000579424 151 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 CENPX-208ENST00000584347 799 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 AC027601.3-201ENST00000622907 509 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 Z98259.2-201ENST00000641583 609 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 AC006504.5-208ENST00000588784 2401 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 MBLAC2-202ENST00000514906 1936 ntBASIC15.25■□□□□ 0.03
ATP2A3Q93084 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ATP2A3Q93084 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP2A3Q93084 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms