Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 AC100757.3-201ENST00000622361 1406 ntBASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 AC118758.2-201ENST00000614242 2813 ntBASIC14.47□□□□□ -0.09
RAB3IL1Q8TBN0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AL391647.1-201ENST00000395664 511 ntBASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AL589987.1-201ENST00000453380 819 ntBASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 ALG3P1-201ENST00000508806 1114 ntBASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AC120045.2-201ENST00000567334 178 ntBASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 SPDYE22P-201ENST00000582158 798 ntBASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 MIR3197-201ENST00000582241 73 ntBASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AC005498.2-205ENST00000593218 784 ntBASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 AC009474.1-201ENST00000455096 1565 ntBASIC14.46□□□□□ -0.09
RAB3IL1Q8TBN0 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 INTS4P2-202ENST00000614726 2019 ntBASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IL1Q8TBN0 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 USP17L6P-201ENST00000382470 1197 ntBASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 AC107890.1-201ENST00000422478 521 ntBASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 AC092580.3-201ENST00000430932 139 ntBASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 MARK2P9-201ENST00000430958 1727 ntBASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 DUX4L27-201ENST00000554796 1261 ntBASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 SPCS2P1-201ENST00000561636 679 ntBASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 RRP7BP-205ENST00000566851 833 ntBASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IL1Q8TBN0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms