Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 AC072061.1-201ENST00000569710 2234 ntBASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.91□□□□□ -0.18
CLHC1Q8NHS4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AL161932.2-201ENST00000435436 679 ntBASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AC005586.2-201ENST00000563946 837 ntBASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AC015936.2-201ENST00000593177 259 ntBASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AC233724.13-201ENST00000598383 410 ntBASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AL358472.3-201ENST00000608147 415 ntBASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AL022328.1-201ENST00000610050 478 ntBASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLHC1Q8NHS4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLHC1Q8NHS4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLHC1Q8NHS4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.9□□□□□ -0.19
CLHC1Q8NHS4 AC009093.10-201ENST00000641956 1442 ntBASIC13.9□□□□□ -0.19
CLHC1Q8NHS4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLHC1Q8NHS4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 CICP8-201ENST00000455800 2813 ntBASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLHC1Q8NHS4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms