Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC022217.1-201ENST00000521069 738 ntBASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 MST1P2-201ENST00000457982 2291 ntBASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCUBE3Q8IX30 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 AC016700.1-201ENST00000429424 312 ntBASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 AC090386.2-201ENST00000623010 1039 ntBASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 AL365209.1-201ENST00000624418 6473 ntBASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 LINC02486-201ENST00000604157 3000 ntBASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.18■□□□□ 0.02
SCUBE3Q8IX30 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 FNTAP2-201ENST00000430308 634 ntBASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 EIF4HP1-201ENST00000453115 687 ntBASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AC091804.1-201ENST00000486888 567 ntBASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AC125604.1-201ENST00000496255 707 ntBASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SCUBE3Q8IX30 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms