Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AC020658.7-201ENST00000624274 2442 ntBASIC12.72□□□□□ -0.37
C11orf88Q6PI97 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
C11orf88Q6PI97 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AL133267.1-201ENST00000398220 340 ntBASIC12.71□□□□□ -0.37
C11orf88Q6PI97 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AP006294.1-201ENST00000415407 339 ntBASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 DOC2GP-202ENST00000514950 1163 ntBASIC12.71□□□□□ -0.37
C11orf88Q6PI97 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 RRP7BP-205ENST00000566851 833 ntBASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AC015910.1-201ENST00000579400 975 ntBASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AC099568.2-201ENST00000609194 695 ntBASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
C11orf88Q6PI97 AC114271.1-201ENST00000612689 2813 ntBASIC12.71□□□□□ -0.37
C11orf88Q6PI97 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
C11orf88Q6PI97 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 AL445209.1-201ENST00000607269 3491 ntBASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.7□□□□□ -0.38
C11orf88Q6PI97 AL512361.1-201ENST00000554200 418 ntBASIC12.7□□□□□ -0.38
C11orf88Q6PI97 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms