Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 FTH1P14-201ENST00000482930 551 ntBASIC13.47□□□□□ -0.25
REEP3Q6NUK4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 KRT8P4-201ENST00000509735 1454 ntBASIC13.47□□□□□ -0.25
REEP3Q6NUK4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 SHC1P1-201ENST00000425230 1745 ntBASIC13.47□□□□□ -0.25
REEP3Q6NUK4 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
REEP3Q6NUK4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AC112492.5-201ENST00000421897 457 ntBASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AL355994.2-201ENST00000447882 704 ntBASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 BTNL10-201ENST00000595971 695 ntBASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AC008735.3-201ENST00000596646 500 ntBASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AC244669.2-201ENST00000612320 853 ntBASIC13.46□□□□□ -0.25
REEP3Q6NUK4 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
REEP3Q6NUK4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.46□□□□□ -0.26
REEP3Q6NUK4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 NCLP1-201ENST00000445357 1963 ntBASIC13.45□□□□□ -0.26
REEP3Q6NUK4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 AL928654.5-201ENST00000624831 2501 ntBASIC13.45□□□□□ -0.26
REEP3Q6NUK4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
REEP3Q6NUK4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms