Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDC42BPAQ5VT25 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 CTSL-202ENST00000342020 933 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 HSD3BP1-201ENST00000286193 1111 ntBASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 RPSAP70-201ENST00000504462 864 ntBASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 MEP1AP1-201ENST00000636082 1097 ntBASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDC42BPAQ5VT25 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 NHP2P1-201ENST00000335274 462 ntBASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 AC023141.7-201ENST00000430646 407 ntBASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 AC099328.1-201ENST00000498809 1030 ntBASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 DUT-207ENST00000559416 635 ntTSL 2 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 AC090643.2-201ENST00000623442 2029 ntBASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDC42BPAQ5VT25 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 MIR632-201ENST00000385193 94 ntBASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 AK2P2-201ENST00000439142 405 ntBASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 RN7SL578P-201ENST00000477781 283 ntBASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC20.93■□□□□ 0.94
CDC42BPAQ5VT25 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms