Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AC007274.1-201ENST00000439805 662 ntBASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AC006033.1-201ENST00000440505 426 ntBASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AL512310.5-201ENST00000551999 515 ntBASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AC140658.4-201ENST00000561990 352 ntBASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTPN20Q4JDL3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 RCC2P8-201ENST00000502779 1035 ntBASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 AC092658.1-201ENST00000505836 891 ntBASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 AL022328.3-201ENST00000607943 679 ntBASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 AC007952.5-201ENST00000572818 1486 ntBASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PTPN20Q4JDL3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 AL928654.5-201ENST00000624831 2501 ntBASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTPN20Q4JDL3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms