Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH1Q13635 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH1Q13635 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PTCH1Q13635 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCH1Q13635 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PTCH1Q13635 RHOC-205ENST00000369636 786 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCH1Q13635 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTCH1Q13635 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC19.44■□□□□ 0.7
PTCH1Q13635 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 DUT-207ENST00000559416 635 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCH1Q13635 MIR4254-201ENST00000581063 76 ntBASIC19.44■□□□□ 0.7
PTCH1Q13635 AC006116.2-201ENST00000589958 988 ntBASIC19.44■□□□□ 0.7
PTCH1Q13635 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTCH1Q13635 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PTCH1Q13635 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCH1Q13635 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC19.44■□□□□ 0.7
PTCH1Q13635 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCH1Q13635 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTCH1Q13635 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCH1Q13635 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC19.43■□□□□ 0.7
PTCH1Q13635 CD44-224ENST00000526669 870 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCH1Q13635 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCH1Q13635 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCH1Q13635 MIR4326-201ENST00000582203 59 ntBASIC19.43■□□□□ 0.7
PTCH1Q13635 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCH1Q13635 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
PTCH1Q13635 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PTCH1Q13635 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTCH1Q13635 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCH1Q13635 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCH1Q13635 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCH1Q13635 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCH1Q13635 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PTCH1Q13635 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCH1Q13635 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 MIR1307-201ENST00000408840 149 ntBASIC19.42■□□□□ 0.7
PTCH1Q13635 RPL18AP16-201ENST00000424057 531 ntBASIC19.42■□□□□ 0.7
PTCH1Q13635 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PTCH1Q13635 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 MTHFR-210ENST00000641407 2387 ntBASIC19.42■□□□□ 0.7
PTCH1Q13635 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC19.42■□□□□ 0.7
PTCH1Q13635 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTCH1Q13635 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PTCH1Q13635 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 DDC-204ENST00000426377 1700 ntTSL 3 BASIC19.42■□□□□ 0.7
PTCH1Q13635 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTCH1Q13635 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC19.42■□□□□ 0.7
PTCH1Q13635 PHBP10-201ENST00000416467 784 ntBASIC19.42■□□□□ 0.7
PTCH1Q13635 PGK1P2-201ENST00000431702 1214 ntBASIC19.42■□□□□ 0.7
PTCH1Q13635 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC19.42■□□□□ 0.7
PTCH1Q13635 AC080013.5-201ENST00000607044 679 ntBASIC19.42■□□□□ 0.7
PTCH1Q13635 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCH1Q13635 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTCH1Q13635 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCH1Q13635 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms