Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 PGAM1P5-201ENST00000548011 764 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AC010328.2-201ENST00000597698 1111 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 AC017083.2-201ENST00000608069 979 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 MIR6805-201ENST00000615055 62 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 AL591471.1-201ENST00000621855 229 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 CCT8L1P-201ENST00000465400 1674 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AHCYP4-201ENST00000419201 1315 ntBASIC12.6□□□□□ -0.39
HIST1H3AP68431 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST1H3AP68431 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST1H3AP68431 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 MIR658-201ENST00000385210 100 ntBASIC12.59□□□□□ -0.39
HIST1H3AP68431 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 XBP1P1-201ENST00000436573 652 ntBASIC12.59□□□□□ -0.39
HIST1H3AP68431 VDAC1P1-201ENST00000439229 848 ntBASIC12.59□□□□□ -0.39
HIST1H3AP68431 MTX1P1-201ENST00000440904 838 ntBASIC12.59□□□□□ -0.39
HIST1H3AP68431 Z93015.1-201ENST00000451718 390 ntBASIC12.59□□□□□ -0.39
HIST1H3AP68431 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 AL023803.2-201ENST00000620080 638 ntBASIC12.59□□□□□ -0.39
HIST1H3AP68431 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST1H3AP68431 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST1H3AP68431 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms