Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ACTA1P68133 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ACTA1P68133 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ACTA1P68133 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ACTA1P68133 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ACTA1P68133 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ACTA1P68133 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ACTA1P68133 AL356585.2-201ENST00000625078 2396 ntBASIC12.91□□□□□ -0.34
ACTA1P68133 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.91□□□□□ -0.34
ACTA1P68133 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ACTA1P68133 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ACTA1P68133 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ACTA1P68133 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.9□□□□□ -0.34
ACTA1P68133 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ACTA1P68133 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 COL6A4P2-202ENST00000504443 2753 ntBASIC12.9□□□□□ -0.34
ACTA1P68133 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ACTA1P68133 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
ACTA1P68133 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
ACTA1P68133 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.9□□□□□ -0.34
ACTA1P68133 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ACTA1P68133 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.9□□□□□ -0.34
ACTA1P68133 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.9□□□□□ -0.34
ACTA1P68133 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.9□□□□□ -0.34
ACTA1P68133 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.9□□□□□ -0.34
ACTA1P68133 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ACTA1P68133 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ACTA1P68133 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.9□□□□□ -0.34
ACTA1P68133 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ACTA1P68133 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ACTA1P68133 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.35
ACTA1P68133 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.9□□□□□ -0.35
ACTA1P68133 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.89□□□□□ -0.35
ACTA1P68133 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.89□□□□□ -0.35
ACTA1P68133 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ACTA1P68133 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.89□□□□□ -0.35
ACTA1P68133 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.89□□□□□ -0.35
ACTA1P68133 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
ACTA1P68133 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.89□□□□□ -0.35
ACTA1P68133 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.89□□□□□ -0.35
ACTA1P68133 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ACTA1P68133 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.89□□□□□ -0.35
ACTA1P68133 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms