Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC10.58□□□□□ -0.72
APOC4P55056 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
APOC4P55056 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
APOC4P55056 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.57□□□□□ -0.72
APOC4P55056 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC10.57□□□□□ -0.72
APOC4P55056 AL161932.2-201ENST00000435436 679 ntBASIC10.57□□□□□ -0.72
APOC4P55056 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC10.57□□□□□ -0.72
APOC4P55056 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC10.57□□□□□ -0.72
APOC4P55056 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC10.57□□□□□ -0.72
APOC4P55056 AC116345.2-201ENST00000512837 523 ntBASIC10.57□□□□□ -0.72
APOC4P55056 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.57□□□□□ -0.72
APOC4P55056 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 CHMP4BP1-201ENST00000556017 588 ntBASIC10.57□□□□□ -0.72
APOC4P55056 AC242376.1-201ENST00000559033 726 ntBASIC10.57□□□□□ -0.72
APOC4P55056 AC105129.2-201ENST00000559536 390 ntBASIC10.57□□□□□ -0.72
APOC4P55056 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC10.57□□□□□ -0.72
APOC4P55056 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 AC093752.3-201ENST00000567343 901 ntBASIC10.57□□□□□ -0.72
APOC4P55056 MIR3907-201ENST00000579424 151 ntBASIC10.57□□□□□ -0.72
APOC4P55056 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC10.57□□□□□ -0.72
APOC4P55056 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
APOC4P55056 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC10.57□□□□□ -0.72
APOC4P55056 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.57□□□□□ -0.72
APOC4P55056 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
APOC4P55056 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC10.57□□□□□ -0.72
APOC4P55056 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 AC064801.2-201ENST00000625052 1303 ntBASIC10.57□□□□□ -0.72
APOC4P55056 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
APOC4P55056 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
APOC4P55056 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
APOC4P55056 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms