Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PDX1P52945 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.02□□□□□ -0.17
PDX1P52945 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PDX1P52945 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PDX1P52945 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.02□□□□□ -0.17
PDX1P52945 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 KRT8P28-201ENST00000433288 1390 ntBASIC14.01□□□□□ -0.17
PDX1P52945 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.01□□□□□ -0.17
PDX1P52945 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 AL583805.1-201ENST00000391389 531 ntBASIC14.01□□□□□ -0.17
PDX1P52945 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.01□□□□□ -0.17
PDX1P52945 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.01□□□□□ -0.17
PDX1P52945 TSPY25P-201ENST00000429463 745 ntBASIC14.01□□□□□ -0.17
PDX1P52945 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.01□□□□□ -0.17
PDX1P52945 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PDX1P52945 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.01□□□□□ -0.17
PDX1P52945 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.01□□□□□ -0.17
PDX1P52945 OR2R1P-201ENST00000441404 914 ntBASIC14.01□□□□□ -0.17
PDX1P52945 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.01□□□□□ -0.17
PDX1P52945 AP000358.1-201ENST00000456260 156 ntBASIC14.01□□□□□ -0.17
PDX1P52945 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.01□□□□□ -0.17
PDX1P52945 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.01□□□□□ -0.17
PDX1P52945 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.01□□□□□ -0.17
PDX1P52945 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 DNM1P30-201ENST00000563586 452 ntBASIC14.01□□□□□ -0.17
PDX1P52945 AL031713.1-201ENST00000564813 661 ntBASIC14.01□□□□□ -0.17
PDX1P52945 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.01□□□□□ -0.17
PDX1P52945 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.01□□□□□ -0.17
PDX1P52945 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.01□□□□□ -0.17
PDX1P52945 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.01□□□□□ -0.17
PDX1P52945 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 AP001267.2-201ENST00000532619 2086 ntBASIC14.01□□□□□ -0.17
PDX1P52945 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PDX1P52945 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.01□□□□□ -0.17
PDX1P52945 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
PDX1P52945 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14□□□□□ -0.17
PDX1P52945 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14□□□□□ -0.17
PDX1P52945 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14□□□□□ -0.17
PDX1P52945 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PDX1P52945 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PDX1P52945 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 RNA5SP359-201ENST00000364838 113 ntBASIC14□□□□□ -0.17
PDX1P52945 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14□□□□□ -0.17
PDX1P52945 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14□□□□□ -0.17
PDX1P52945 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14□□□□□ -0.17
PDX1P52945 AC114501.1-201ENST00000445949 172 ntBASIC14□□□□□ -0.17
PDX1P52945 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14□□□□□ -0.17
PDX1P52945 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14□□□□□ -0.17
PDX1P52945 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14□□□□□ -0.17
PDX1P52945 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PDX1P52945 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14□□□□□ -0.17
PDX1P52945 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PDX1P52945 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14□□□□□ -0.17
PDX1P52945 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms