Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.04□□□□□ -0.32
APOBEC1P41238 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOBEC1P41238 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBEC1P41238 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.04□□□□□ -0.32
APOBEC1P41238 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.04□□□□□ -0.32
APOBEC1P41238 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 OR2R1P-201ENST00000441404 914 ntBASIC13.04□□□□□ -0.32
APOBEC1P41238 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.04□□□□□ -0.32
APOBEC1P41238 AC104073.2-201ENST00000453737 312 ntBASIC13.04□□□□□ -0.32
APOBEC1P41238 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.04□□□□□ -0.32
APOBEC1P41238 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.04□□□□□ -0.32
APOBEC1P41238 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.04□□□□□ -0.32
APOBEC1P41238 AC013355.1-201ENST00000562625 723 ntBASIC13.04□□□□□ -0.32
APOBEC1P41238 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBEC1P41238 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
APOBEC1P41238 AL132994.2-201ENST00000603120 687 ntBASIC13.04□□□□□ -0.32
APOBEC1P41238 AL022328.3-201ENST00000607943 679 ntBASIC13.04□□□□□ -0.32
APOBEC1P41238 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
APOBEC1P41238 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.04□□□□□ -0.32
APOBEC1P41238 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOBEC1P41238 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.04□□□□□ -0.32
APOBEC1P41238 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
APOBEC1P41238 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOBEC1P41238 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 AC018735.1-201ENST00000437208 1502 ntBASIC13.03□□□□□ -0.32
APOBEC1P41238 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 CCT8L1P-201ENST00000465400 1674 ntBASIC13.03□□□□□ -0.32
APOBEC1P41238 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
APOBEC1P41238 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 MST1P2-201ENST00000457982 2291 ntBASIC13.03□□□□□ -0.32
APOBEC1P41238 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 KRT18P15-201ENST00000458108 1291 ntBASIC13.03□□□□□ -0.32
APOBEC1P41238 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AC009779.1-201ENST00000551138 283 ntBASIC13.03□□□□□ -0.32
APOBEC1P41238 AL512310.5-201ENST00000551999 515 ntBASIC13.03□□□□□ -0.32
APOBEC1P41238 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.03□□□□□ -0.32
APOBEC1P41238 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.03□□□□□ -0.32
APOBEC1P41238 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AC092299.1-201ENST00000632679 757 ntBASIC13.03□□□□□ -0.32
APOBEC1P41238 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.03□□□□□ -0.32
APOBEC1P41238 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms