Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AL596257.1-201ENST00000641463 2694 ntBASIC20.88■□□□□ 0.93
KDM5CP41229 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KDM5CP41229 GH1-203ENST00000351388 685 ntTSL 2 BASIC20.88■□□□□ 0.93
KDM5CP41229 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC20.88■□□□□ 0.93
KDM5CP41229 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC20.88■□□□□ 0.93
KDM5CP41229 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC20.88■□□□□ 0.93
KDM5CP41229 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC20.88■□□□□ 0.93
KDM5CP41229 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC20.88■□□□□ 0.93
KDM5CP41229 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KDM5CP41229 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KDM5CP41229 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KDM5CP41229 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
KDM5CP41229 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDM5CP41229 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC20.88■□□□□ 0.93
KDM5CP41229 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KDM5CP41229 AP001267.2-201ENST00000532619 2086 ntBASIC20.87■□□□□ 0.93
KDM5CP41229 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
KDM5CP41229 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
KDM5CP41229 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 KRT18P44-201ENST00000416086 1285 ntBASIC20.87■□□□□ 0.93
KDM5CP41229 FAM197Y6-201ENST00000420524 766 ntBASIC20.87■□□□□ 0.93
KDM5CP41229 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC20.87■□□□□ 0.93
KDM5CP41229 IGKV1OR-2-201ENST00000457995 350 ntBASIC20.87■□□□□ 0.93
KDM5CP41229 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC20.87■□□□□ 0.93
KDM5CP41229 AC099328.1-201ENST00000498809 1030 ntBASIC20.87■□□□□ 0.93
KDM5CP41229 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC20.87■□□□□ 0.93
KDM5CP41229 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC20.87■□□□□ 0.93
KDM5CP41229 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC20.87■□□□□ 0.93
KDM5CP41229 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC20.87■□□□□ 0.93
KDM5CP41229 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KDM5CP41229 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
KDM5CP41229 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC20.87■□□□□ 0.93
KDM5CP41229 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
KDM5CP41229 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 FAU-201ENST00000279259 461 ntTSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 CCND3P2-201ENST00000579393 537 ntBASIC20.86■□□□□ 0.93
KDM5CP41229 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC20.86■□□□□ 0.93
KDM5CP41229 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC20.86■□□□□ 0.93
KDM5CP41229 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC20.86■□□□□ 0.93
KDM5CP41229 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC20.86■□□□□ 0.93
KDM5CP41229 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC20.86■□□□□ 0.93
KDM5CP41229 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.86■□□□□ 0.93
KDM5CP41229 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KDM5CP41229 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
KDM5CP41229 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 USP17L6P-201ENST00000382470 1197 ntBASIC20.85■□□□□ 0.93
KDM5CP41229 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 MED15P3-201ENST00000413613 326 ntBASIC20.85■□□□□ 0.93
KDM5CP41229 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC20.85■□□□□ 0.93
KDM5CP41229 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC20.85■□□□□ 0.93
KDM5CP41229 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC20.85■□□□□ 0.93
KDM5CP41229 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC20.85■□□□□ 0.93
KDM5CP41229 RPL29P2-201ENST00000488409 460 ntBASIC20.85■□□□□ 0.93
KDM5CP41229 AC008494.1-201ENST00000497612 796 ntBASIC20.85■□□□□ 0.93
KDM5CP41229 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC20.85■□□□□ 0.93
KDM5CP41229 MIR4326-201ENST00000582203 59 ntBASIC20.85■□□□□ 0.93
KDM5CP41229 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC20.85■□□□□ 0.93
KDM5CP41229 AL353622.2-201ENST00000605846 425 ntBASIC20.85■□□□□ 0.93
KDM5CP41229 AC123912.6-201ENST00000612657 315 ntBASIC20.85■□□□□ 0.93
KDM5CP41229 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 DDC-204ENST00000426377 1700 ntTSL 3 BASIC20.85■□□□□ 0.93
KDM5CP41229 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KDM5CP41229 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 WARS-203ENST00000358655 2466 ntTSL 2 BASIC20.85■□□□□ 0.93
KDM5CP41229 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC20.85■□□□□ 0.93
KDM5CP41229 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC20.85■□□□□ 0.93
KDM5CP41229 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC20.85■□□□□ 0.93
KDM5CP41229 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KDM5CP41229 AL008638.4-201ENST00000624792 1315 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms