Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC6A4P31645 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 TUBB8P4-201ENST00000511806 1324 ntBASIC14.72□□□□□ -0.05
SLC6A4P31645 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC6A4P31645 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC6A4P31645 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC6A4P31645 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 AC152010.1-201ENST00000415779 2006 ntBASIC14.72□□□□□ -0.05
SLC6A4P31645 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC6A4P31645 DUTP3-201ENST00000450025 415 ntBASIC14.72□□□□□ -0.05
SLC6A4P31645 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC6A4P31645 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC6A4P31645 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.72□□□□□ -0.05
SLC6A4P31645 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC6A4P31645 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC14.72□□□□□ -0.05
SLC6A4P31645 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.72□□□□□ -0.05
SLC6A4P31645 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.72□□□□□ -0.05
SLC6A4P31645 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SLC6A4P31645 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 AC067931.2-201ENST00000623655 2003 ntBASIC14.71□□□□□ -0.05
SLC6A4P31645 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SLC6A4P31645 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 AC007952.5-201ENST00000572818 1486 ntBASIC14.71□□□□□ -0.05
SLC6A4P31645 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SLC6A4P31645 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
SLC6A4P31645 AL627231.1-201ENST00000394467 1125 ntBASIC14.71□□□□□ -0.05
SLC6A4P31645 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.71□□□□□ -0.05
SLC6A4P31645 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC6A4P31645 AC114947.1-202ENST00000514136 344 ntBASIC14.71□□□□□ -0.05
SLC6A4P31645 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 AL512310.5-201ENST00000551999 515 ntBASIC14.71□□□□□ -0.05
SLC6A4P31645 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC6A4P31645 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SLC6A4P31645 SIGLEC18P-201ENST00000602271 909 ntBASIC14.71□□□□□ -0.05
SLC6A4P31645 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.71□□□□□ -0.05
SLC6A4P31645 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.71□□□□□ -0.05
SLC6A4P31645 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.71□□□□□ -0.05
SLC6A4P31645 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SLC6A4P31645 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SLC6A4P31645 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC6A4P31645 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SLC6A4P31645 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC6A4P31645 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SLC6A4P31645 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC6A4P31645 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC6A4P31645 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
SLC6A4P31645 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SLC6A4P31645 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SLC6A4P31645 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A4P31645 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A4P31645 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SLC6A4P31645 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SLC6A4P31645 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms