Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LMO1P25800 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.12□□□□□ -0.47
LMO1P25800 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 MIR1909-201ENST00000411312 80 ntBASIC12.12□□□□□ -0.47
LMO1P25800 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.12□□□□□ -0.47
LMO1P25800 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.12□□□□□ -0.47
LMO1P25800 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.12□□□□□ -0.47
LMO1P25800 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 AC021016.3-201ENST00000608367 477 ntBASIC12.12□□□□□ -0.47
LMO1P25800 Z98259.2-201ENST00000641583 609 ntBASIC12.12□□□□□ -0.47
LMO1P25800 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 LAP3P2-201ENST00000454686 1454 ntBASIC12.12□□□□□ -0.47
LMO1P25800 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 AC007326.2-201ENST00000624224 7579 ntBASIC12.12□□□□□ -0.47
LMO1P25800 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 FAM90A12P-201ENST00000519497 2375 ntBASIC12.12□□□□□ -0.47
LMO1P25800 FAM90A24P-201ENST00000520792 2369 ntBASIC12.12□□□□□ -0.47
LMO1P25800 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.12□□□□□ -0.47
LMO1P25800 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.12□□□□□ -0.47
LMO1P25800 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO1P25800 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO1P25800 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LMO1P25800 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LMO1P25800 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.11□□□□□ -0.47
LMO1P25800 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LMO1P25800 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.11□□□□□ -0.47
LMO1P25800 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.11□□□□□ -0.47
LMO1P25800 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 ANKRD19P-201ENST00000338192 862 ntBASIC12.11□□□□□ -0.47
LMO1P25800 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO1P25800 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.11□□□□□ -0.47
LMO1P25800 AL354877.1-201ENST00000424412 413 ntBASIC12.11□□□□□ -0.47
LMO1P25800 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.11□□□□□ -0.47
LMO1P25800 CSF2RBP1-201ENST00000447905 391 ntBASIC12.11□□□□□ -0.47
LMO1P25800 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.11□□□□□ -0.47
LMO1P25800 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.11□□□□□ -0.47
LMO1P25800 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO1P25800 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO1P25800 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
LMO1P25800 AP005482.1-201ENST00000563722 1273 ntBASIC12.11□□□□□ -0.47
LMO1P25800 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.11□□□□□ -0.47
LMO1P25800 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.11□□□□□ -0.47
LMO1P25800 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO1P25800 MIR6775-201ENST00000617557 69 ntBASIC12.11□□□□□ -0.47
LMO1P25800 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LMO1P25800 AL162426.1-201ENST00000624141 743 ntBASIC12.11□□□□□ -0.47
LMO1P25800 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
LMO1P25800 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
LMO1P25800 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms