Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
MSR1P21757 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MSR1P21757 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
MSR1P21757 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MSR1P21757 AC041040.2-201ENST00000622926 2899 ntBASIC12.79□□□□□ -0.36
MSR1P21757 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
MSR1P21757 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
MSR1P21757 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 USP17L6P-201ENST00000382470 1197 ntBASIC12.78□□□□□ -0.36
MSR1P21757 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.78□□□□□ -0.36
MSR1P21757 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 FAM21FP-201ENST00000426241 1131 ntBASIC12.78□□□□□ -0.36
MSR1P21757 AC012441.2-201ENST00000444843 739 ntBASIC12.78□□□□□ -0.36
MSR1P21757 KRT223P-202ENST00000449164 1292 ntBASIC12.78□□□□□ -0.36
MSR1P21757 AC022210.1-201ENST00000449856 793 ntBASIC12.78□□□□□ -0.36
MSR1P21757 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.78□□□□□ -0.36
MSR1P21757 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.78□□□□□ -0.36
MSR1P21757 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 AC017083.2-201ENST00000608069 979 ntBASIC12.78□□□□□ -0.36
MSR1P21757 COX11-210ENST00000639671 696 ntBASIC12.78□□□□□ -0.36
MSR1P21757 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.78□□□□□ -0.36
MSR1P21757 AC090643.2-201ENST00000623442 2029 ntBASIC12.78□□□□□ -0.36
MSR1P21757 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
MSR1P21757 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.78□□□□□ -0.36
MSR1P21757 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
MSR1P21757 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
MSR1P21757 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
MSR1P21757 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
MSR1P21757 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.77□□□□□ -0.36
MSR1P21757 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
MSR1P21757 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.77□□□□□ -0.36
MSR1P21757 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
MSR1P21757 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.77□□□□□ -0.36
MSR1P21757 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.77□□□□□ -0.37
MSR1P21757 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
MSR1P21757 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MSR1P21757 AL354877.1-201ENST00000424412 413 ntBASIC12.77□□□□□ -0.37
MSR1P21757 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.77□□□□□ -0.37
MSR1P21757 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.77□□□□□ -0.37
MSR1P21757 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.77□□□□□ -0.37
MSR1P21757 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
MSR1P21757 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.77□□□□□ -0.37
MSR1P21757 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.77□□□□□ -0.37
MSR1P21757 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
MSR1P21757 AC021016.3-201ENST00000608367 477 ntBASIC12.77□□□□□ -0.37
MSR1P21757 MIR6805-201ENST00000615055 62 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms