Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.05□□□□□ -0.32
PPP3CBP16298 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PPP3CBP16298 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PPP3CBP16298 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.05□□□□□ -0.32
PPP3CBP16298 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
PPP3CBP16298 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
PPP3CBP16298 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 EIF4HP1-201ENST00000453115 687 ntBASIC13.05□□□□□ -0.32
PPP3CBP16298 AC005740.2-201ENST00000511085 419 ntBASIC13.05□□□□□ -0.32
PPP3CBP16298 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.05□□□□□ -0.32
PPP3CBP16298 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PPP3CBP16298 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.05□□□□□ -0.32
PPP3CBP16298 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 AL136295.7-201ENST00000619226 1200 ntBASIC13.05□□□□□ -0.32
PPP3CBP16298 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
PPP3CBP16298 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.05□□□□□ -0.32
PPP3CBP16298 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.05□□□□□ -0.32
PPP3CBP16298 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.05□□□□□ -0.32
PPP3CBP16298 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.05□□□□□ -0.32
PPP3CBP16298 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.05□□□□□ -0.32
PPP3CBP16298 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PPP3CBP16298 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
PPP3CBP16298 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PPP3CBP16298 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.04□□□□□ -0.32
PPP3CBP16298 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.04□□□□□ -0.32
PPP3CBP16298 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
PPP3CBP16298 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
PPP3CBP16298 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.04□□□□□ -0.32
PPP3CBP16298 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.04□□□□□ -0.32
PPP3CBP16298 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.04□□□□□ -0.32
PPP3CBP16298 NDUFV2P1-201ENST00000596415 907 ntBASIC13.04□□□□□ -0.32
PPP3CBP16298 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.04□□□□□ -0.32
PPP3CBP16298 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.04□□□□□ -0.32
PPP3CBP16298 AC105206.1-202ENST00000314927 2368 ntBASIC13.04□□□□□ -0.32
PPP3CBP16298 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PPP3CBP16298 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.04□□□□□ -0.32
PPP3CBP16298 AP001267.2-201ENST00000532619 2086 ntBASIC13.04□□□□□ -0.32
PPP3CBP16298 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
PPP3CBP16298 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.04□□□□□ -0.32
PPP3CBP16298 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
PPP3CBP16298 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
PPP3CBP16298 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.04□□□□□ -0.32
PPP3CBP16298 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
PPP3CBP16298 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms