Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 AC104581.4-201ENST00000623126 3052 ntBASIC12.95□□□□□ -0.34
HLA-DOBP13765 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 AC144522.1-201ENST00000625111 1658 ntBASIC12.95□□□□□ -0.34
HLA-DOBP13765 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DOBP13765 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DOBP13765 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 CYP4F23P-201ENST00000593402 1579 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 MBLAC2-202ENST00000514906 1936 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 GOLGA2P4-201ENST00000441462 777 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 ST13P19-201ENST00000442505 1124 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 FAM86HP-204ENST00000513466 959 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 AL583810.1-201ENST00000553344 1045 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 AL160314.3-201ENST00000556041 767 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 AC009884.2-201ENST00000603110 324 ntBASIC12.94□□□□□ -0.34
HLA-DOBP13765 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
HLA-DOBP13765 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.94□□□□□ -0.34
HLA-DOBP13765 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
HLA-DOBP13765 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
HLA-DOBP13765 AC111170.3-201ENST00000624282 2464 ntBASIC12.93□□□□□ -0.34
HLA-DOBP13765 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms