Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC24.25■■□□□ 1.47
TOP2AP11388 AP000920.1-201ENST00000531824 344 ntBASIC24.25■■□□□ 1.47
TOP2AP11388 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC24.25■■□□□ 1.47
TOP2AP11388 GRAMD4P6-201ENST00000556999 244 ntBASIC24.25■■□□□ 1.47
TOP2AP11388 NEK4P3-201ENST00000604859 544 ntBASIC24.25■■□□□ 1.47
TOP2AP11388 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TOP2AP11388 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TOP2AP11388 AC011477.7-201ENST00000617163 1440 ntBASIC24.25■■□□□ 1.47
TOP2AP11388 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC24.25■■□□□ 1.47
TOP2AP11388 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
TOP2AP11388 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TOP2AP11388 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TOP2AP11388 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TOP2AP11388 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC24.25■■□□□ 1.47
TOP2AP11388 RCC2P5-201ENST00000492126 1487 ntBASIC24.25■■□□□ 1.47
TOP2AP11388 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
TOP2AP11388 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC24.25■■□□□ 1.47
TOP2AP11388 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC24.25■■□□□ 1.47
TOP2AP11388 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC24.25■■□□□ 1.47
TOP2AP11388 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TOP2AP11388 HNRNPA1P42-201ENST00000458678 957 ntBASIC24.25■■□□□ 1.47
TOP2AP11388 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC24.25■■□□□ 1.47
TOP2AP11388 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC24.25■■□□□ 1.47
TOP2AP11388 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TOP2AP11388 RN7SL524P-201ENST00000581152 300 ntBASIC24.25■■□□□ 1.47
TOP2AP11388 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
TOP2AP11388 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TOP2AP11388 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TOP2AP11388 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TOP2AP11388 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
TOP2AP11388 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC24.24■■□□□ 1.47
TOP2AP11388 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC24.24■■□□□ 1.47
TOP2AP11388 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TOP2AP11388 AL390755.1-201ENST00000623716 2027 ntBASIC24.24■■□□□ 1.47
TOP2AP11388 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC24.24■■□□□ 1.47
TOP2AP11388 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC24.24■■□□□ 1.47
TOP2AP11388 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TOP2AP11388 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TOP2AP11388 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC24.24■■□□□ 1.47
TOP2AP11388 AC015818.1-201ENST00000451011 244 ntBASIC24.24■■□□□ 1.47
TOP2AP11388 NDUFB2P1-201ENST00000506966 295 ntBASIC24.24■■□□□ 1.47
TOP2AP11388 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC24.24■■□□□ 1.47
TOP2AP11388 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC24.24■■□□□ 1.47
TOP2AP11388 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
TOP2AP11388 DUT-207ENST00000559416 635 ntTSL 2 BASIC24.24■■□□□ 1.47
TOP2AP11388 RN7SL602P-201ENST00000578326 324 ntBASIC24.24■■□□□ 1.47
TOP2AP11388 RN7SL718P-201ENST00000581254 303 ntBASIC24.24■■□□□ 1.47
TOP2AP11388 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
TOP2AP11388 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC24.24■■□□□ 1.47
TOP2AP11388 AC110057.1-201ENST00000636031 898 ntBASIC24.24■■□□□ 1.47
TOP2AP11388 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TOP2AP11388 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TOP2AP11388 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TOP2AP11388 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
TOP2AP11388 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TOP2AP11388 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
TOP2AP11388 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC24.23■■□□□ 1.47
TOP2AP11388 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
TOP2AP11388 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TOP2AP11388 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC24.23■■□□□ 1.47
TOP2AP11388 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TOP2AP11388 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC24.23■■□□□ 1.47
TOP2AP11388 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC24.23■■□□□ 1.47
TOP2AP11388 PMEL-214ENST00000550447 901 ntTSL 3 BASIC24.23■■□□□ 1.47
TOP2AP11388 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC24.23■■□□□ 1.47
TOP2AP11388 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC24.23■■□□□ 1.47
TOP2AP11388 CR392039.1-201ENST00000623217 204 ntBASIC24.23■■□□□ 1.47
TOP2AP11388 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TOP2AP11388 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
TOP2AP11388 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
TOP2AP11388 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC24.23■■□□□ 1.47
TOP2AP11388 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC24.22■■□□□ 1.47
TOP2AP11388 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC24.22■■□□□ 1.47
TOP2AP11388 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC24.22■■□□□ 1.47
TOP2AP11388 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC24.22■■□□□ 1.47
TOP2AP11388 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 HSD3BP1-201ENST00000286193 1111 ntBASIC24.22■■□□□ 1.47
TOP2AP11388 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC24.22■■□□□ 1.47
TOP2AP11388 AL773545.2-201ENST00000442149 472 ntBASIC24.22■■□□□ 1.47
TOP2AP11388 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
TOP2AP11388 AC233724.9-201ENST00000511694 407 ntBASIC24.22■■□□□ 1.47
TOP2AP11388 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC24.22■■□□□ 1.47
TOP2AP11388 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC24.22■■□□□ 1.47
TOP2AP11388 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC24.22■■□□□ 1.47
TOP2AP11388 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
TOP2AP11388 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC24.22■■□□□ 1.47
TOP2AP11388 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TOP2AP11388 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC24.22■■□□□ 1.47
TOP2AP11388 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
TOP2AP11388 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TOP2AP11388 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TOP2AP11388 KRT18P44-201ENST00000416086 1285 ntBASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms