Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AHCYP4-201ENST00000419201 1315 ntBASIC11.32□□□□□ -0.6
CD28P10747 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 AC092978.1-202ENST00000637590 1327 ntBASIC11.32□□□□□ -0.6
CD28P10747 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
CD28P10747 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CD28P10747 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CD28P10747 AC139712.1-201ENST00000378256 1875 ntBASIC11.32□□□□□ -0.6
CD28P10747 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.32□□□□□ -0.6
CD28P10747 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
CD28P10747 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 AL592076.1-201ENST00000424448 303 ntBASIC11.31□□□□□ -0.6
CD28P10747 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 AC253536.4-201ENST00000440539 267 ntBASIC11.31□□□□□ -0.6
CD28P10747 OR2R1P-201ENST00000441404 914 ntBASIC11.31□□□□□ -0.6
CD28P10747 AP000358.1-201ENST00000456260 156 ntBASIC11.31□□□□□ -0.6
CD28P10747 RN7SL181P-201ENST00000462921 277 ntBASIC11.31□□□□□ -0.6
CD28P10747 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 PGAM1P5-201ENST00000548011 764 ntBASIC11.31□□□□□ -0.6
CD28P10747 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC11.31□□□□□ -0.6
CD28P10747 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC11.31□□□□□ -0.6
CD28P10747 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC11.31□□□□□ -0.6
CD28P10747 PHBP15-201ENST00000574228 665 ntBASIC11.31□□□□□ -0.6
CD28P10747 RN7SL555P-201ENST00000584742 339 ntBASIC11.31□□□□□ -0.6
CD28P10747 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC11.31□□□□□ -0.6
CD28P10747 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 COX6A1P2-201ENST00000620597 330 ntBASIC11.31□□□□□ -0.6
CD28P10747 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC11.31□□□□□ -0.6
CD28P10747 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.31□□□□□ -0.6
CD28P10747 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 KRT18P9-201ENST00000604826 1300 ntBASIC11.31□□□□□ -0.6
CD28P10747 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CD28P10747 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 AGAP7P-201ENST00000582299 2062 ntBASIC11.31□□□□□ -0.6
CD28P10747 AGAP14-201ENST00000624701 2060 ntBASIC11.31□□□□□ -0.6
CD28P10747 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CD28P10747 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CD28P10747 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 TCAF2P1-201ENST00000291129 2421 ntBASIC11.3□□□□□ -0.6
CD28P10747 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.3□□□□□ -0.6
CD28P10747 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CD28P10747 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CD28P10747 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.3□□□□□ -0.6
CD28P10747 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CD28P10747 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CD28P10747 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CD28P10747 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms