Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 TUBB8P4-201ENST00000511806 1324 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 MIR346-201ENST00000362234 95 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC074338.1-201ENST00000416825 156 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC009947.1-201ENST00000444350 727 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC018712.1-201ENST00000455767 687 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AF186996.4-201ENST00000467186 377 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AL135744.1-201ENST00000565098 629 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AP000842.3-202ENST00000569238 1080 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AP002472.1-201ENST00000577490 586 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC092364.2-202ENST00000597012 1073 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 AC010503.4-201ENST00000615487 688 ntBASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
H2AFB1P0C5Y9 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 PKP4P1-201ENST00000426801 2158 ntBASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 SPDYE17-201ENST00000412399 783 ntBASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 KRT18P64-201ENST00000434946 1219 ntBASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 AC106730.1-201ENST00000566722 1090 ntBASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 AL121723.1-201ENST00000445194 1519 ntBASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
H2AFB1P0C5Y9 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms