Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 AC074138.1-201ENST00000611182 1303 ntBASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40ALP0C0E4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 MIR557-201ENST00000385239 98 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 RN7SL181P-201ENST00000462921 277 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 IQSEC3P1-201ENST00000538799 536 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 SIGLEC18P-201ENST00000602271 909 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AL022334.2-201ENST00000610000 484 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AC007718.1-201ENST00000621078 280 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AC018442.1-201ENST00000421439 2061 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 BEND3P1-201ENST00000421591 1944 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AC126335.2-201ENST00000623362 4637 ntBASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40ALP0C0E4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40ALP0C0E4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms