Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 ACKR1-201ENST00000368121 1240 ntBASIC12.66□□□□□ -0.38
SFTPBP07988 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.66□□□□□ -0.38
SFTPBP07988 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.66□□□□□ -0.38
SFTPBP07988 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.66□□□□□ -0.38
SFTPBP07988 AC093433.1-201ENST00000458048 571 ntBASIC12.66□□□□□ -0.38
SFTPBP07988 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.66□□□□□ -0.38
SFTPBP07988 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.66□□□□□ -0.38
SFTPBP07988 AC009486.1-201ENST00000569860 813 ntBASIC12.66□□□□□ -0.38
SFTPBP07988 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.66□□□□□ -0.38
SFTPBP07988 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SFTPBP07988 MIR6805-201ENST00000615055 62 ntBASIC12.66□□□□□ -0.38
SFTPBP07988 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.66□□□□□ -0.38
SFTPBP07988 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SFTPBP07988 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SFTPBP07988 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SFTPBP07988 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 KRT8P35-201ENST00000483942 1338 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 AC134312.5-201ENST00000568031 1313 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 BAATP1-201ENST00000412284 1225 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 AL355864.2-201ENST00000447420 863 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 AC022210.1-201ENST00000449856 793 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 FO681548.1-201ENST00000455617 1132 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 KRT18P25-201ENST00000508931 1278 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 AP001889.1-201ENST00000525414 633 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 SNX29P1-201ENST00000548357 1007 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 AL022328.1-201ENST00000610050 478 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SFTPBP07988 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 AL136172.1-201ENST00000598590 1394 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SFTPBP07988 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.65□□□□□ -0.38
SFTPBP07988 TCAF1P1-201ENST00000414990 2232 ntBASIC12.65□□□□□ -0.38
SFTPBP07988 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.65□□□□□ -0.38
SFTPBP07988 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms