Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.51□□□□□ -0.09
APOA4P06727 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 CHMP1AP1-201ENST00000445563 662 ntBASIC14.51□□□□□ -0.09
APOA4P06727 AL035414.1-201ENST00000451327 857 ntBASIC14.51□□□□□ -0.09
APOA4P06727 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.51□□□□□ -0.09
APOA4P06727 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.51□□□□□ -0.09
APOA4P06727 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 AL358472.3-201ENST00000608147 415 ntBASIC14.51□□□□□ -0.09
APOA4P06727 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.51□□□□□ -0.09
APOA4P06727 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
APOA4P06727 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.51□□□□□ -0.09
APOA4P06727 AC105206.1-202ENST00000314927 2368 ntBASIC14.51□□□□□ -0.09
APOA4P06727 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.51□□□□□ -0.09
APOA4P06727 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA4P06727 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA4P06727 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA4P06727 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
APOA4P06727 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 AC099336.1-201ENST00000417053 1171 ntBASIC14.5□□□□□ -0.09
APOA4P06727 FAM21FP-201ENST00000426241 1131 ntBASIC14.5□□□□□ -0.09
APOA4P06727 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.5□□□□□ -0.09
APOA4P06727 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.5□□□□□ -0.09
APOA4P06727 ATP5G2P4-201ENST00000442175 420 ntBASIC14.5□□□□□ -0.09
APOA4P06727 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.5□□□□□ -0.09
APOA4P06727 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
APOA4P06727 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA4P06727 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
APOA4P06727 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
APOA4P06727 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.5□□□□□ -0.09
APOA4P06727 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOA4P06727 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 AC015909.5-201ENST00000624336 2266 ntBASIC14.49□□□□□ -0.09
APOA4P06727 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOA4P06727 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOA4P06727 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
APOA4P06727 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOA4P06727 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
APOA4P06727 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.49□□□□□ -0.09
APOA4P06727 HIST2H2BB-201ENST00000449108 381 ntBASIC14.49□□□□□ -0.09
APOA4P06727 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms