Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NKX2-2O95096 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-2O95096 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
NKX2-2O95096 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-2O95096 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
NKX2-2O95096 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-2O95096 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX2-2O95096 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX2-2O95096 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX2-2O95096 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX2-2O95096 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX2-2O95096 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 PFN1P12-201ENST00000455938 534 ntBASIC13.27□□□□□ -0.29
NKX2-2O95096 MARK2P5-201ENST00000507649 634 ntBASIC13.27□□□□□ -0.29
NKX2-2O95096 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX2-2O95096 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX2-2O95096 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX2-2O95096 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-2O95096 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-2O95096 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NKX2-2O95096 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX2-2O95096 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX2-2O95096 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 AC004898.1-201ENST00000451057 766 ntBASIC13.26□□□□□ -0.29
NKX2-2O95096 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX2-2O95096 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.26□□□□□ -0.29
NKX2-2O95096 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.26□□□□□ -0.29
NKX2-2O95096 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.26□□□□□ -0.29
NKX2-2O95096 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 AL157813.1-201ENST00000612996 587 ntBASIC13.26□□□□□ -0.29
NKX2-2O95096 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 AC010327.5-201ENST00000586923 3061 ntBASIC13.26□□□□□ -0.29
NKX2-2O95096 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-2O95096 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-2O95096 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-2O95096 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NKX2-2O95096 AC111170.3-201ENST00000624282 2464 ntBASIC13.25□□□□□ -0.29
NKX2-2O95096 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NKX2-2O95096 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NKX2-2O95096 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.25□□□□□ -0.29
NKX2-2O95096 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms