Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF40O75150 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF40O75150 AC005695.3-201ENST00000614522 232 ntBASIC15.72■□□□□ 0.11
RNF40O75150 AL008638.5-201ENST00000623814 1298 ntBASIC15.72■□□□□ 0.11
RNF40O75150 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF40O75150 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF40O75150 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RNF40O75150 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF40O75150 AC004241.5-201ENST00000623870 2448 ntBASIC15.72■□□□□ 0.11
RNF40O75150 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RNF40O75150 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
RNF40O75150 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RNF40O75150 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RNF40O75150 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF40O75150 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RNF40O75150 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF40O75150 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF40O75150 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF40O75150 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF40O75150 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RNF40O75150 MTX1P1-201ENST00000440904 838 ntBASIC15.71■□□□□ 0.11
RNF40O75150 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.71■□□□□ 0.11
RNF40O75150 HOMER2P2-201ENST00000451621 847 ntBASIC15.71■□□□□ 0.11
RNF40O75150 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF40O75150 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF40O75150 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF40O75150 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF40O75150 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF40O75150 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF40O75150 AC006453.4-201ENST00000636949 1252 ntBASIC15.71■□□□□ 0.11
RNF40O75150 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RNF40O75150 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF40O75150 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 AC073548.1-201ENST00000624088 1882 ntBASIC15.71■□□□□ 0.11
RNF40O75150 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RNF40O75150 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF40O75150 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
RNF40O75150 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
RNF40O75150 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RNF40O75150 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RNF40O75150 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RNF40O75150 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF40O75150 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
RNF40O75150 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF40O75150 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RNF40O75150 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF40O75150 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF40O75150 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 AC114271.1-201ENST00000612689 2813 ntBASIC15.7■□□□□ 0.1
RNF40O75150 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF40O75150 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF40O75150 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF40O75150 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms