Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PFDN6O15212 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PFDN6O15212 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PFDN6O15212 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN6O15212 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PFDN6O15212 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.53□□□□□ -0.08
PFDN6O15212 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 AC063926.2-201ENST00000623766 1308 ntBASIC14.53□□□□□ -0.08
PFDN6O15212 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 MIR326-201ENST00000362220 95 ntBASIC14.53□□□□□ -0.08
PFDN6O15212 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PFDN6O15212 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN6O15212 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.53□□□□□ -0.08
PFDN6O15212 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.53□□□□□ -0.08
PFDN6O15212 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.53□□□□□ -0.08
PFDN6O15212 AC079178.1-201ENST00000420915 656 ntBASIC14.53□□□□□ -0.08
PFDN6O15212 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.53□□□□□ -0.08
PFDN6O15212 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.53□□□□□ -0.08
PFDN6O15212 AC104989.1-201ENST00000519711 778 ntBASIC14.53□□□□□ -0.08
PFDN6O15212 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PFDN6O15212 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PFDN6O15212 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.53□□□□□ -0.08
PFDN6O15212 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.53□□□□□ -0.08
PFDN6O15212 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PFDN6O15212 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.52□□□□□ -0.08
PFDN6O15212 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PFDN6O15212 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
PFDN6O15212 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.52□□□□□ -0.08
PFDN6O15212 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.52□□□□□ -0.08
PFDN6O15212 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PFDN6O15212 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PFDN6O15212 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PFDN6O15212 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PFDN6O15212 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.52□□□□□ -0.09
PFDN6O15212 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.52□□□□□ -0.09
PFDN6O15212 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.52□□□□□ -0.09
PFDN6O15212 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.52□□□□□ -0.09
PFDN6O15212 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.52□□□□□ -0.09
PFDN6O15212 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.52□□□□□ -0.09
PFDN6O15212 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.52□□□□□ -0.09
PFDN6O15212 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.52□□□□□ -0.09
PFDN6O15212 DUX4L46-201ENST00000566845 751 ntBASIC14.52□□□□□ -0.09
PFDN6O15212 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.52□□□□□ -0.09
PFDN6O15212 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.52□□□□□ -0.09
PFDN6O15212 AC244157.2-201ENST00000616239 1006 ntBASIC14.52□□□□□ -0.09
PFDN6O15212 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PFDN6O15212 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 BEND3P1-201ENST00000421591 1944 ntBASIC14.52□□□□□ -0.09
PFDN6O15212 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC14.52□□□□□ -0.09
PFDN6O15212 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.52□□□□□ -0.09
PFDN6O15212 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PFDN6O15212 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PFDN6O15212 AL356585.2-201ENST00000625078 2396 ntBASIC14.52□□□□□ -0.09
PFDN6O15212 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PFDN6O15212 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
PFDN6O15212 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN6O15212 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN6O15212 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN6O15212 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN6O15212 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN6O15212 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.51□□□□□ -0.09
PFDN6O15212 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.51□□□□□ -0.09
PFDN6O15212 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN6O15212 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN6O15212 TUBB8P4-201ENST00000511806 1324 ntBASIC14.51□□□□□ -0.09
PFDN6O15212 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN6O15212 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms