Protein–RNA interactions for Protein: A2A2Y4

FRMD3, FERM domain-containing protein 3, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3A2A2Y4 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FRMD3A2A2Y4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FRMD3A2A2Y4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
FRMD3A2A2Y4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AL359881.3-201ENST00000602640 1721 ntBASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AC008805.1-201ENST00000590892 364 ntBASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AC004923.1-202ENST00000642106 209 ntBASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AC087386.2-201ENST00000623212 4637 ntBASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FRMD3A2A2Y4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 AC005562.1-201ENST00000583030 3219 ntBASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 BAP1-211ENST00000615113 489 ntBASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FRMD3A2A2Y4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
FRMD3A2A2Y4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FRMD3A2A2Y4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FRMD3A2A2Y4 CCT8L1P-201ENST00000465400 1674 ntBASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 AL139385.1-201ENST00000611744 3272 ntBASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FRMD3A2A2Y4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms