Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 GNG10P1-201ENST00000452289 199 ntBASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCDC187A0A096LP49 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 AC234644.1-201ENST00000406065 370 ntBASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 ACTG1P19-201ENST00000418987 1116 ntBASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 RN7SL396P-201ENST00000471086 295 ntBASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 AC145285.5-201ENST00000562217 361 ntBASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 AC244250.3-201ENST00000620749 366 ntBASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CCDC187A0A096LP49 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms