Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20BQ9P0W2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 MIR600HG-201ENST00000449175 5984 ntBASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20BQ9P0W2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 AL928921.2-201ENST00000641325 2442 ntBASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 AC140658.4-201ENST00000561990 352 ntBASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 BRD7P5-201ENST00000299197 1822 ntBASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20BQ9P0W2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.46■□□□□ 0.39
HMG20BQ9P0W2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms