Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 FGD5P1-202ENST00000614866 2498 ntBASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDH11YQ9BZA8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 AL139158.3-201ENST00000641212 1562 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 ACTBP14-201ENST00000411655 1089 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 ACTBP7-201ENST00000418351 1124 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 AP000244.1-201ENST00000424582 201 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 AL929302.1-201ENST00000426556 871 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 RN7SL147P-201ENST00000487345 298 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 RN7SL288P-201ENST00000490496 291 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 AC087203.1-201ENST00000532111 1181 ntBASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDH11YQ9BZA8 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 AC092384.3-202ENST00000564646 2873 ntBASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 USP17L6P-201ENST00000382470 1197 ntBASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 TYMSP2-201ENST00000589501 424 ntBASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDH11YQ9BZA8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDH11YQ9BZA8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms