Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GOLGA2P8-201ENST00000505201 779 ntBASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 AC093300.1-201ENST00000510368 1201 ntBASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 AC087203.1-201ENST00000532111 1181 ntBASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 AL627230.2-201ENST00000613254 655 ntBASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTFDC1Q9BY42 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.21■□□□□ 0.34
RTFDC1Q9BY42 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RTFDC1Q9BY42 AC232323.1-201ENST00000540724 2099 ntBASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 AC011498.7-201ENST00000624986 2027 ntBASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 AL357373.1-201ENST00000394974 322 ntBASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 OR2W2P-201ENST00000406313 909 ntBASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 AC132825.4-202ENST00000578792 434 ntBASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 AC005777.1-201ENST00000588332 187 ntBASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.2■□□□□ 0.34
RTFDC1Q9BY42 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 GEMIN8P4-201ENST00000380526 729 ntBASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AF274858.1-201ENST00000406288 372 ntBASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 TPT1P11-201ENST00000458482 498 ntBASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 HNRNPA1P5-201ENST00000558213 966 ntBASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC073869.4-201ENST00000620841 800 ntBASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms